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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:53:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 9.
LR862389.2:5262880-5262897
TGACAGATATAACCCAGAACAATTTCAGTC5262880TCAGTTGTTTCTTGTGGGGTTGGAATCTTCAGATAGAGAGGTCTCTTC
Chionomys nivalis genome assembly, chromosome: 17.
OX465465.1:5285273-5285290
TGGCAGGTATAACCAAATCCAATCTCAGTC5285273TCAGTTGTTTCTTGTGGGGTTGGAATCTTCAGATAGAGAGGTCTCTTC
Sylvilagus floridanus genome assembly, chromosome: 22.
OX463244.1:27242133-27242150
TCACAGATTCGGCACTATTTTCATTTTTGA27242133TCAGTTGTTTCTTGTGGGCTGCCTTTGTAGCAGAATCTACGGTTTCTA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 12.
OX596096.1:6673163-6673180
CTCAATTATTTCGTCATTTCAATAAGGTTT6673163TCAGTTGTTTCTTGTGGGTTTCCAAGTAAACAGTCAAACAGTCTTCAA
Muntiacus reevesi genome assembly, chromosome: 3.
OZ005626.1:200989231-200989248
CTCAATTATTTTGTGATTTCAATAAGGTTT200989231TCAGTTGTTTCTTGTGGGTTTCCAAGTAAACAGTCAAACAGTCTTCAA
Furcifer pardalis isolate Fpa_1 chromosome 7.
CP126896.1:27653340-27653357
CCTAGAACCCAGTAATGAGTCCTCTTTGCC27653340TCAGTTGTTTCTTGTGGGATTACTGTCTCTTAAGCTCCTAGTGGTCCC
Erpetoichthys calabaricus genome assembly, chromosome: 1.
LR536432.2:54265229-54265246
AACGAATAATGCAAAACACAGAAGTTGTTT54265229TCAGTTGTTTCTTGTGGGCTAGGATTTAAGCTTAAATCTCTAGGAAAG
Streptopelia turtur genome assembly, chromosome: 1.
LR594551.2:107630759-107630776
ATATTAGATCCTAAAGAAGAGCCATCTTAG107630759TCAGTTGTTTCTTGTGGGGAAGTATCATCACTTCTGGTCTGGGAAGCT
Pseudochaenichthys georgianus genome assembly, chromosome: 23.
LR792568.1:25167944-25167961
AGATTTGTTTATCTTTAGATTCATCCCGTG25167944TCAGTTGTTTCTTGTGGGGGGGAAGCCAACTGAAGGTGCCTTTCTTTT
Somateria mollissima genome assembly, chromosome: 12.
OX598314.1:18901005-18901022
TTCTTTTTCTAGGTGGTAAGGGTGTAGTTT18901005TCAGTTGTTTCTTGTGGGGAGAAGAATCCTAGCCATACTTCAGGTTCT
Somateria mollissima genome assembly, chromosome: 12.
OX598701.1:18811384-18811401
TTCTTTTTCTAGGTGGTAAGGGTGTAGTTT18811384TCAGTTGTTTCTTGTGGGGAGAAGAATCCTAGCCATACTTCAGGTTCT
Falco punctatus genome assembly, chromosome: 4.
OY723436.1:51410536-51410553
AAAACCCCATGTTTCCAGCAAGTTACTTGT51410536TCAGTTGTTTCTTGTGGGACACTCGAGTTCAAACACTTGTGCCACGAG
Raja brachyura genome assembly, chromosome: 2.
OY740782.1:109627892-109627909
GCCACGTTCCTTAGTCTCGACAGGAAAGTG109627892TCAGTTGTTTCTTGTGGGTCTTGTCTTAGCCCTTGGAACTCATACCGA
Mobula hypostoma genome assembly, chromosome: 6.
OY992597.1:30532675-30532692
ATTCTAGAAATAGATTTCTTTCTTTGTAAT30532675TCAGTTGTTTCTTGTGGGGAATATAATGCTTGTTCGGTGTCATTTGCT
Anas acuta genome assembly, chromosome: 10.
OZ009973.1:18675464-18675481
TTCTTTTTCTAGGTGGTAAGGGTGTAGTTT18675464TCAGTTGTTTCTTGTGGGGAGAAGAATCCTAGCCATACTTCAGGTTCT
Geopsychrobacteraceae bacterium isolate 83e969e6-e5ac-4757-b3b4-5cc8fa5ada5b genome assembly, chromosome: 2.
OY762645.1:33905-33922
ACCACTCCACCGCTTCCCTGATCGGCCCGA33905TCAGTTGTTTCTTGTGGGCATGGCGGTCCAGCGGTTCCACCAGAACCT
Geopsychrobacteraceae bacterium isolate 9b9ec7dd-163a-4fa2-980c-b25c90b2862a genome assembly, chromosome: 1.
OY776219.1:230627-230644
ACCACTCCACCGCTTCCCTGATCGGCCCGA230627TCAGTTGTTTCTTGTGGGCATGGCGGTCCAGCGGTTCCACCAGAACCT
Geopsychrobacteraceae bacterium isolate f8de7df7-17c8-42b0-849c-d6069997f774 genome assembly, chromosome: 1.
OY782666.1:181406-181423
ACCACTCCACCGCTTCCCTGATCGGCCCGA181406TCAGTTGTTTCTTGTGGGCATGGCGGTCCAGCGGTTCCACCAGAACCT
Geopsychrobacteraceae bacterium isolate 698afd50-45b2-4781-bb07-7a3ab48e4337 genome assembly, chromosome: 1.
OY782861.1:182287-182304
ACCACTCCACCGCTTCCCTGATCGGCCCGA182287TCAGTTGTTTCTTGTGGGCATGGCGGTCCAGCGGTTCCACCAGAACCT
KBrB085J21R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB085J21, genomic survey sequence.
DX074826.1:416-433
TTTTGAATATTGGAAAGAAAAACATAAAAA416TCAGTTGTTTCTTGTGGGTCGATGCTAATGTTGAGAGTTCGCTTAAAA
Rattus norvegicus clone CH230-102A6, WORKING DRAFT SEQUENCE, 4 unordered pieces.
AC127437.3:8309-8326
TCTCAGCAGTAGCCAGGATGAACCCTCCCT8309TCAGTTGTTTCTTGTGGGGTGGCTCTTCACTACAAGACAGGACACTAA
Rattus norvegicus clone CH230-474M1, WORKING DRAFT SEQUENCE.
AC128210.2:64712-64729
TCTCAGCAGTAGCCAGGATGAACCCTCCCT64712TCAGTTGTTTCTTGTGGGGTGGCTCTTCACTACAAGACAGGACACTAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:38125-38142
TTTTGAATATTGTAAAGAAAAACATAGAAA38125TCAGTTGTTTCTTGTGGGTCGATGCTAATGTTGAGAGTTCGCTTAGAA
Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0458A05.
AP002870.1:28016-28033
ATGGAGAGACCTCTCGATTTAGATTCACCA28016TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
AP014957.1:14249447-14249464
ATGGAGAGACCTCTCGATTTAGATTCACCA14249447TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 1.
AP027385.1:14294276-14294293
ATGGAGAGACCTCTCGATTTAGATTCACCA14294276TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
CP012609.1:14782585-14782602
ATGGAGAGACCTCTCGATTTAGATTCACCA14782585TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Oryza sativa Indica Group cultivar Shuhui498 chromosome 1, partial sequence.
CP018157.1:14694112-14694129
ATGGAGAGACCTCTCGATTTAGATTCACCA14694112TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAGAGCACAACAAC
Oryza sativa Indica Group cultivar Minghui 63 chromosome 1.
CP054676.1:14850306-14850323
ATGGAGAGACCTCTCGATTTAGATTCACCA14850306TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAGAGCACAACAAC
Oryza sativa Indica Group cultivar Zhenshan 97 chromosome 1.
CP056052.1:14620140-14620157
ATGGAGAGACCTCTCGATTTAGATTCACCA14620140TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:107545184-107545201
TGATGGATTGGGCTGATCCCCTTTACTTCT107545184TCAGTTGTTTCTTGTGGGAGGCATTGACTATAAATAAAGTGAAGGATA
Oryza sativa Japonica Group cultivar Nipponbare isolate AGIS-1.0 chromosome 1.
CP132235.1:14294619-14294636
ATGGAGAGACCTCTCGATTTAGATTCACCA14294619TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Oryza sativa indica subgroup cultivar ZH8015 chromosome 01.
CP141105.1:14780158-14780175
ATGGAGAGACCTCTCGATTTAGATTCACCA14780158TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAGAGCACAACAAC
Oryza sativa genome assembly, chromosome: 1.
OX637246.1:14403750-14403767
ATGGAGAGACCTCTCGATTTAGATTCACCA14403750TCAGTTGTTTCTTGTGGGATGGGTAGGGACTAACAAAAGCACACAACC
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:558195265-558195282
GGGTTAGGTTGTGTTCTCATGCAGTAGAGG558195265TCAGTTGTTTCTTGTGGGTCTCGGCAGTTACGTCCCCATGAACGCAAC
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:558240763-558240780
GGGTTAGGTTGTGTTCTCATGCAGTAGAGG558240763TCAGTTGTTTCTTGTGGGTCTCGGCAGTTGCGTCCCCATGAACCCAAC
Leptolyngbya sp. BL0902 chromosome, complete genome.
CP046155.1:2561298-2561315
GTTCTTTAACTGTACTCAATATTTATCTTC2561298TCAGTTGTTTCTTGTGGGGAAAGAGGTGGGCTGTTCGATGCGCGTGGA
Glaucopsyche alexis genome assembly, chromosome: 9.
FR990051.1:15433616-15433633
AAATTGTCAACGACCCACAGGTCTATAGTG15433616TCAGTTGTTTCTTGTGGGCGTTACGAACAGTGGTATTACCGACTATTA
Marthasterias glacialis genome assembly, chromosome: 17.
OU452235.1:9261945-9261962
GCCAAGCGGCCTTGTGCACTGGACTCGGAC9261945TCAGTTGTTTCTTGTGGGTTTGAATCTCGGTCTTGACACTTAACAGTT
Piscicola geometra genome assembly, chromosome: 4.
OX030958.1:833554-833571
ATCAATGAGGAGAACTCTGGATTCAATGCT833554TCAGTTGTTTCTTGTGGGCTGACCTTGATTGTGCCAGTGCCTCATTTG
Piscicola geometra genome assembly, chromosome: 10.
OX030964.1:1021362-1021379
ATCAACGAGGAGAAATCTGGATTAAATGCT1021362TCAGTTGTTTCTTGTGGGCTCAACTTGATTGTGCCAGTGCCGAAAGAG
Dysmachus trigonus genome assembly, chromosome: 1.
OX454319.1:53177621-53177638
GTTTTATTGTGTCGGTTAGGAATTCTATCG53177621TCAGTTGTTTCTTGTGGGGGGGGTAGCTTTCTCTGCACATTCCGTGAC
Aspidapion aeneum genome assembly, chromosome: 7.
OY755044.1:14776053-14776070
TCTAAAAAAAAACTAAAGGCCAAATTTATT14776053TCAGTTGTTTCTTGTGGGCGAATCTAATGAAAAAAGCGTTTTAAAATG
Anania hortulata genome assembly, chromosome: 8.
OY756395.1:12054451-12054468
TACCTATAATGCCTCCAGTTAATACCAATT12054451TCAGTTGTTTCTTGTGGGATTTAGAAAATCCGCATAGCCCTTATCAAG
Elysia crispata genome assembly, chromosome: 9.
OY973774.1:18590770-18590787
GATTTACAGCTACTTGCTTTGCTCGGTAAC18590770TCAGTTGTTTCTTGTGGGACGTGAAGAACTGCTCAGCTGATCTCGCCG
Cepaea hortensis genome assembly, chromosome: 1.
OY992876.1:217875344-217875361
CATCTAACTTCTGTAATCAGTTTACGTTTT217875344TCAGTTGTTTCTTGTGGGACTTGTTCATTGGATTTTCTGTCAGTCCAC
Cepaea hortensis genome assembly, chromosome: 1.
OY992876.1:243864297-243864314
CATTTAATTTCTCTAATCAGTTTACGGTTC243864297TCAGTTGTTTCTTGTGGGACTTGCTCATTGGTTTTTTTCTACTTGTCC
Cepaea hortensis genome assembly, chromosome: 4.
OY992879.1:50648021-50648038
TGGAATATCTATCTATTGTTGTATTTCTTT50648021TCAGTTGTTTCTTGTGGGTCTGTTAATTTGATGTGTTTGTAATCAGAA
Cepaea hortensis genome assembly, chromosome: 4.
OY992879.1:50664034-50664051
TGGAATATCTTTCTATTGTTGTATTTCTTT50664034TCAGTTGTTTCTTGTGGGTCTGTTAATTTGATGTGTTTGTAATCAGAA
Cepaea hortensis genome assembly, chromosome: 4.
OY992879.1:50892831-50892848
TGGAATATCTTTCTATTGTTGTATTTCTTT50892831TCAGTTGTTTCTTGTGGGTCTGTTAATTTGATGTGTTTGTAATCAGAA
Cepaea hortensis genome assembly, chromosome: 12.
OY992887.1:65401954-65401971
CGTCTAATTTCTCAAATCACTTTACAGTTT65401954TCAGTTGTTTCTTGTGGGATTTGGTCATTGGTTTTTCTGTCTGTCCAT
Cepaea hortensis genome assembly, chromosome: 16.
OY992891.1:34152086-34152103
ATGTCTAAATCTCTTATCAATTTACGGTTT34152086TCAGTTGTTTCTTGTGGGACTTGGTCATTGGTTTTTCTGTCTGAGCTA
Phania funesta genome assembly, chromosome: 3.
OZ010654.1:17462568-17462585
TGTGAACAGGCAGCAGGTAAAAGTTCTAGG17462568TCAGTTGTTTCTTGTGGGGGTTAGACGTTAATTATTATTGAAGTATGG
Magelona johnstoni genome assembly, chromosome: 1.
OZ012684.1:91379173-91379190
TTGTTATTCCAAATAAATGTTTGAGTAAGA91379173TCAGTTGTTTCTTGTGGGTGAAAATACCTGATCTCAGTTTCAGATCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGTTGTTTCTTGTGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGTTGTTTCTTGTGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.290 | 0.281 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGTTGTTTCTTGTGGG&k=0&no_gap=0&offset=0&limit=50
0.428 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=CCCACAAGAAACAACTGA&k=0&no_gap=0&offset=0&limit=0
0.428 | 0.000 | cgi_end;

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